Uses of Class
pal.substmodel.NucleotideModel

Packages that use NucleotideModel

pal.substmodel

Classes describing substitution models, i.e.

Uses of NucleotideModel in pal.substmodel

Subclasses of NucleotideModel in pal.substmodel

class	F81 Felsenstein 1981 model of nucleotide evolution
class	F84 Felsenstein 1984 (PHYLIP) model of nucleotide evolution
class	GTR GTR (general time reversible) model of nucleotide evolution Lanave, C., G.
class	HKY Hasegawa-Kishino-Yano model of nucleotide evolution Hasegawa, M., H.
class	TN Tamura-Nei model of nucleotide evolution Tamura, K.

Methods in pal.substmodel that return NucleotideModel

static NucleotideModel

NucleotideModel.getInstance(int modelID, double[] params, double[] freq) Create nucleotide substitution model according to model type