pal.misc
Interface Report

All Known Subinterfaces:

AnnotationAlignment, CharacterAlignment, RateMatrix, SubstitutionModel

All Known Implementing Classes:

AbstractAlignment, AbstractRateMatrix, AminoAcidModel, BLOSUM62, BootstrappedAlignment, CachedRateMatrix, ClusterTree, CoalescentIntervals, CodonModel, ConcatenatedAlignment, ConcatenatedAnnotatedAlignment, ConstantMutationRate, ConstantPopulation, ConstExpConst, ConstExpGrowth, CPREV, Dayhoff, DemographicModel, ExpandingPopulation, ExponentialGrowth, F81, F84, GammaRates, GapBalancedAlignment, GeneralRateDistributionSubstitutionModel, GTR, HKY, IndelAlignment, IndelAnnotatedAlignment, InvariableSites, JTT, JumbledAlignment, KishinoHasegawaTest, ModelSupport, MTREV24, MultiLocusAnnotatedAlignment, MutationRateModel, NeighborJoiningTree, NucleotideModel, RateDistribution, ReadAlignment, ReadAlignmentOld, ReadTree, ShimodairaHasegawaTest, SimpleAlignment, SimpleAnnotatedAlignment, SimpleCharacterAlignment, SimpleTree, SimulatedAlignment, SingleClassSubstitutionModel, SitePattern, SkylinePlot, SteppedMutationRate, StrippedAlignment, StrippedAnnotatedAlignment, SUPGMATree, TN, Tree.TreeBase, TwoStateModel, UniformRate, UPGMATree, VT, WAG, WindowedMutationRate, YangCodonModel, YangCodonModel.SimpleNeutralSelection, YangCodonModel.SimplePositiveSelection

public interface Report

interface for classes that can print out a human readable report of itself

Version:

$Id: Report.java,v 1.4 2002/12/05 04:27:28 matt Exp $

Author:

Korbinian Strimmer

Method Summary

void	report(java.io.PrintWriter out) print human readable report (e.g., on parameters and associated model)

Method Detail

report

void report(java.io.PrintWriter out)

print human readable report (e.g., on parameters and associated model)

Parameters:

out - output stream