Uses of Class
pal.math.MersenneTwisterFast

Packages that use MersenneTwisterFast

pal.math	Classes for math stuff such as optimisation, numerical derivatives, matrix exponentials, random numbers, special function etc.
pal.substmodel	Classes describing substitution models, i.e.
pal.treesearch

Uses of MersenneTwisterFast in pal.math

Fields in pal.math declared as MersenneTwisterFast

static MersenneTwisterFast

MathUtils.random A random number generator that is initialized with the clock when this class is loaded into the JVM.

Uses of MersenneTwisterFast in pal.substmodel

Constructors in pal.substmodel with parameters of type MersenneTwisterFast

SequenceSimulator(SubstitutionModel model, int sequenceLength, MersenneTwisterFast random, boolean stochasticDistribution)
A constructor (with no provided random number generator - a fresh one is created)

Uses of MersenneTwisterFast in pal.treesearch

Methods in pal.treesearch with parameters of type MersenneTwisterFast

void	FreeBranch.doNNI(MersenneTwisterFast r)
static java.lang.String[][]	SearcherUtils.split(java.lang.String[] leafNames, MersenneTwisterFast r)