Uses of Package
pal.io

Packages that use pal.io

pal.coalescent	Classes to model population genetic processes using the coalescent.
pal.io	Classes for simple (formatted) input/output from/to files, strings and standard-in/out streams.
pal.mep	Classes for the analysis of "measurably evolving populations" (mep).
pal.substmodel	Classes describing substitution models, i.e.

Classes in pal.io used by pal.coalescent

FormattedOutput
tools to simplify formatted output to a stream

Classes in pal.io used by pal.io

FormattedInput
tools to simplify formatted input from an input stream

FormattedOutput
tools to simplify formatted output to a stream

InputSource
convenience class to open input streams linked to files, stdin, and strings

NexusParseException
Exception class for the NexusParser.

OutputTarget
convenience class to create output streams linked to files, stdout, and strings

Classes in pal.io used by pal.mep

FormattedOutput
tools to simplify formatted output to a stream

Classes in pal.io used by pal.substmodel

FormattedOutput
tools to simplify formatted output to a stream