pal.gui
Class PositionedNode

java.lang.Object
  pal.tree.SimpleNode
      pal.gui.PositionedNode

All Implemented Interfaces:

java.io.Serializable, AttributeNode, Node

public class PositionedNode
extends SimpleNode

A tree node that has a scalar position for the purposes of drawing the tree.

Version:

$Id: PositionedNode.java,v 1.6 2002/01/14 04:18:13 matt Exp $

Author:

Alexei Drummond

See Also:

Serialized Form

Field Summary

protected double

x

Fields inherited from interface pal.tree.AttributeNode

CLADE_PROBABILITY, MEAN_CLADE_HEIGHT, NODE_HEIGHT_SE, SUBTREE_PROBABILITY

Constructor Summary

PositionedNode(Node node)

PositionedNode(Node node, Node highlightNode)
Builds a tree based on node, but highlights highlightNode

Method Summary

void	calculatePositions()
Node	getPeer()
double	getX()
boolean	isHighlighted()

Methods inherited from class pal.tree.SimpleNode

addChild, getAttribute, getAttributeNames, getBranchLength, getBranchLengthSE, getChild, getChildCount, getIdentifier, getNodeHeight, getNumber, getParent, getSequence, getSequenceString, hasChildren, init, init, init, insertChild, isLeaf, isRoot, lengths2HeightsContemp, removeChild, removeParent, reset, setAttribute, setBranchLength, setBranchLengthSE, setChild, setIdentifier, setNodeHeight, setNodeHeight, setNumber, setParent, setSequence, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

x

protected double x

Constructor Detail

PositionedNode

public PositionedNode(Node node,
                      Node highlightNode)

Builds a tree based on node, but highlights highlightNode

PositionedNode

public PositionedNode(Node node)

Method Detail

calculatePositions

public void calculatePositions()

getPeer

public Node getPeer()

isHighlighted

public boolean isHighlighted()

getX

public double getX()