Uses of Interface
pal.eval.LHCalculator.Leaf

Packages that use LHCalculator.Leaf

pal.eval

Classes for evaluating evolutionary hypothesis (chi-square and likelihood criteria) and estimating model parameters.

Uses of LHCalculator.Leaf in pal.eval

Classes in pal.eval that implement LHCalculator.Leaf

class

SimpleLeafCalculator

Methods in pal.eval that return LHCalculator.Leaf

LHCalculator.Leaf	LHCalculator.Generator.createNewLeaf(int[] patternStateMatchup, int numberOfPatterns) Create anew leaf calculator
LHCalculator.Leaf	LHCalculator.Generator.createNewLeaf(int[] patternStateMatchup, int numberOfPatterns, LHCalculator.Generator parentGenerator)
LHCalculator.Leaf	LHCalculator.Leaf.getCopy() Create a new Leaf calculator that has exactly the same properties as this one (but is different such that it may be used independently)
LHCalculator.Leaf	SimpleLeafCalculator.getCopy()

Constructors in pal.eval with parameters of type LHCalculator.Leaf

SimpleUnconstrainedLikelihoodModel.LeafImpl(LHCalculator.Leaf base, SubstitutionModel model)