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 Category          Contigs   Bases (incl. N's)      Real Bases  N50 Map Contig
 -----------------------------------------------------------------------------
 Euchromatin           372       2,825,640,200   2,825,631,540      27,332,148
 Heterochromatin        33           6,601,238       6,601,238         248,267
 Unlocalized           138          25,263,129      25,065,625         186,888
 Alt-haplotype           2           8,996,941       8,996,941       4,498,470
 -----------------------------------------------------------------------------
 Overall               545       2,866,501,508   2,866,295,344      26,259,569
 
		      The following set of UCSC summary statistics 
		    differ slightly from those reported by NCBI in these ways:
		     
		      
		      NCBI identified 33 contigs as heterochromatin. The 
		      UCSC numbers include the euchromatin and heterochromatin contigs combined, and also include 
		      the mitochondrial genome as an
 euchromatin contig.
		      UCSC includes the two alternative haplotypes for the 
		      MHC region in chr6 in the _random section for that chromosome. As a result, they show up 
		      in the unlocalized stats.  NCBI
 splits out the two alternative haplotypes for this MHC 
		      region.
	   	      After subtracting out the alt haplotypes, UCSC reports 
		      24,799,811 unlocalized bases, whichdiffers slightly from NCBI's number. This may be due to 
		      a last-minute rearrangement of
 chromosome 8, 
	  	      which UCSC included in its stats but NCBI may not have 
		      included.
 
                                                                                                            |-----Ordered------| |------Random------|
  Chr  Assembled Size  Sequenced  Total Gap  Non-Euch.  Non-Euch.  Euch. Gap  Euch. Gap  Bases in Unplaced  Map Contig   N50 Map  Map Contig  N50 Map 
 Name     (inc. Gaps)       Size       Size   Gap Size  Gap Count       Size      Count   Auxiliary Clones       Count    Contig       Count   Contig
 ----------------------------------------------------------------------------------------------------------------------------------------------------
    1       245203898  218712898   26491000   21100000          4    5391000        105            9962637          94   5417179          53   184644
    2       243315028  237043677    6271351    4200000          3    2071351         22             964032          22  68373974          11   172807
    3       199411731  193607233    5804498    4613000          4    1191498         17             373185          15  29247566           2   201725
    4       191610523  186580523    5030000    3000000          1    2030000         16             819494          18  23437594           9   139078
    5       180967295  177524972    3442323    3050000          2     392323         15                  -          12  21842058           -        -
    6       170740541  166880541    3860000    3110000          4     750000          9           11611844          11  48884767          10  4265243
    7       158431299  154546299    3885000    3200000          5     685000          7             755352          13  47493540           7   149466
    8       145908738  141694337    4214401    3200000          2    1014401         15             377716          17  37699987           2   199315
    9       134505819  115187719   19318100   17000000          2    2318100         48            2036476          44  34895695          11   185143
   10       135480874  130710874    4770000    3100000          3    1670000         25             610249          26  30112630           3   179013
   11       134978784  130709420    4269364    3550000          3     719364          8             150110          10  38488550           1   150110
   12       133464434  129328334    4136100    3085000          3    1051100         11             490431          11  32815934           3   165593
   13       114151656   95511656   18640000   17970000          4     670000          5             364659           6  55334817           2   184590
   14       105311216   87191216   18120000   18120000          3          0          0                  -           1  87191216           -        -
   15       100114055   81117055   18997000   18260000          2     737000         10             316089          11  53614549           2   182896
   16        89995999   79890795   10105204    9800000          2     305204         13              24360          13  19938058           1    24360
   17        81691216   77480855    4210361    3110000          3    1100361         11             287440          13  17920314           2   182945
   18        77753510   74534531    3218979    3000000          1     218979          4                  -           6  20074199           -        -
   19        63790860   55780860    8010000    8000000          3      10000          2             251858           4  31383029           2   159169
   20        63644868   59424990    4219878    4008000          3     211878          4                  -           7  24982290           -        -
   21        46976537   33924747   13051790   12978622          3      73168          8                  -           5  28602556           -        -
   22        49476972   34352072   15124900   14530000          4     594900         10                  -          11  23178213           -        -
    X       152634166  147686666    4947500    3055000          3    1892500         36            4209112          29  19044037          14   548553
    Y        50961097   22761097   28200000   25000000          2    3200000          5             191708           6   6380532           1   191708
    M           16571      16571          0          0          0          0          0                  -           1     16571           -        -
   Un               -         -           -          -          -          -          -             461077           -         -           4    99952
 ----------------------------------------------------------------------------------------------------------------------------------------------------
 Overall
   Chrom   3070537687 2832199938  238337749  210039622         69   28298127        406           33796752         406  26259569         140   221307
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