| Download Chimera.         
             Configure for automatic launch in web browsers. 
              UCSF Chimera is an interactive molecular
             modeling system that supports 3-D visualization of protein 
             structures.  It runs as an application on the user's
             computer.  The UCSC Genome Browser provides links to launch 
             Chimera as a helper application for proteins with solved 
             structures deposited in PDB.  Protein residues with non-synonymous 
             SNPs identified by LS-SNP PDB are annotated in Chimera by the UCSC 
             Browser for genome assemblies with LS-SNP PDB entries (currently 
             human).   Links to Chimera are available in the Protein Domain 
             and Structure Information section of the UCSC Genes 
             details page when the gene is associated with a PDB structure.  
             Residues with non-synonymous SNPs are colored gold and labeled 
             with the dbSNP identifier.  Additionally, for SNPs in LS-SNP 
             PDB, links to Chimera are generated on the SNP details page with 
             the residue associated with the selected SNP colored red, and the 
             other non-synonymous SNP residues colored gold.   Chimera version 1.3 or newer must be installed locally on your 
             computer from the 
             Download Chimera page.  In order to automatically 
             launch Chimera from one of these links, it must be configured as 
             a web browser helper application as described in the 
             Chimera Web Data page.   IMPORTANT NOTE: The UCSC Genome Browser group is unable 
             to provide support for installing or using UCSF Chimera.  If you need 
             help, please see the 
             UCSF Chimera Documentation
             or inquire on the 
             Chimera users discussion mailing list.    |