immundata: A Unified Data Layer for Single-Cell, Spatial and Bulk Immunomics

Provides a unified data layer for single-cell, spatial and bulk T-cell and B-cell immune receptor repertoire data, integrating diverse data formats such as AIRR and raw sequencing files. Includes utilities for receptor aggregation, metadata normalization, and clonotype filtering.

Version: 0.0.1
Depends: R (≥ 4.1.0)
Imports: cli, R6, checkmate, dplyr, duckplyr, glue, lifecycle, readr, rlang
Suggests: testthat (≥ 3.0.0)
Published: 2025-04-08
DOI: 10.32614/CRAN.package.immundata
Author: Vadim I. Nazarov ORCID iD [aut, cre]
Maintainer: Vadim I. Nazarov <support at immunomind.com>
License: Apache License (≥ 2)
NeedsCompilation: no
Materials: README
CRAN checks: immundata results

Documentation:

Reference manual: immundata.pdf

Downloads:

Package source: immundata_0.0.1.tar.gz
Windows binaries: r-devel: immundata_0.0.1.zip, r-release: immundata_0.0.1.zip, r-oldrel: immundata_0.0.1.zip
macOS binaries: r-release (arm64): immundata_0.0.1.tgz, r-oldrel (arm64): immundata_0.0.1.tgz, r-release (x86_64): immundata_0.0.1.tgz, r-oldrel (x86_64): immundata_0.0.1.tgz

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