Orangutan: Automated Analysis of Phenotypic Data

Provides functions to analyze and visualize meristic and mensural phenotypic data in a comparative framework. The package implements an automated pipeline that summarizes traits, identifies diagnostic variables among groups, performs multivariate and univariate statistical analyses, and produces publication-ready graphics. Earlier implementation are described in Torres (2025) <doi:10.64898/2025.12.18.695244> (v1.0.0) and Torres (2026) <doi:10.1002/ece3.73111> (v2.0.0).

Version: 2.1.0
Imports: adegenet, dplyr, dunn.test, ggplot2, multcompView, RColorBrewer, rlang, scales, tidyr, vegan, withr
Suggests: ragg
Published: 2026-03-31
DOI: 10.32614/CRAN.package.Orangutan
Author: Javier Torres [aut, cre]
Maintainer: Javier Torres <metalofis at gmail.com>
BugReports: https://github.com/metalofis/Orangutan-R/issues
License: MIT + file LICENSE
URL: https://github.com/metalofis/Orangutan-R
NeedsCompilation: no
Materials: README
CRAN checks: Orangutan results

Documentation:

Reference manual: Orangutan.html , Orangutan.pdf

Downloads:

Package source: Orangutan_2.1.0.tar.gz
Windows binaries: r-devel: Orangutan_2.0.0.zip, r-release: Orangutan_2.0.0.zip, r-oldrel: Orangutan_2.0.0.zip
macOS binaries: r-release (arm64): Orangutan_2.0.0.tgz, r-oldrel (arm64): Orangutan_2.0.0.tgz, r-release (x86_64): Orangutan_2.0.0.tgz, r-oldrel (x86_64): Orangutan_2.1.0.tgz
Old sources: Orangutan archive

Linking:

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