Last updated on 2025-10-19 00:48:56 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.01 | 253.50 | 266.51 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.32 | 260.22 | 270.54 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 318.39 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 352.72 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.32 | 269.79 | 285.11 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.69 | 272.97 | 288.66 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 188.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 189.00 | 210.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 184.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 25.00 | 239.00 | 264.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [83s/133s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.449, system: 0.049, elapsed: 1.589 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.154, system: 0.256, elapsed: 12.875 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.016, elapsed: 0.260 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.923, system: 0.294, elapsed: 5.548 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.006, elapsed: 0.240 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.393, system: 0.648, elapsed: 21.158 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.625, system: 0.073, elapsed: 2.373 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.217, system: 0.279, elapsed: 13.447 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.017, elapsed: 0.270 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.948, system: 0.283, elapsed: 6.341 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.009, elapsed: 0.278 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.690, system: 0.692, elapsed: 23.505 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.701, system: 0.078, elapsed: 2.222 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.264, system: 0.334, elapsed: 12.215 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.015, elapsed: 0.243 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.832, system: 0.271, elapsed: 4.812 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.012, elapsed: 0.263 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.241, system: 0.279, elapsed: 1.454 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.008, system: 1.031, elapsed: 22.110 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.855, system: 0.123, elapsed: 3.039 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.146, system: 0.216, elapsed: 19.635 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.014, elapsed: 0.291 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.788, system: 0.196, elapsed: 6.155 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.003, elapsed: 0.264 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.279, system: 0.462, elapsed: 28.163 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.061, system: 1.049, elapsed: 58.540 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/120s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.548, system: 0.047, elapsed: 2.739 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.114, system: 0.283, elapsed: 15.263 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.017, elapsed: 0.277 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.784, system: 0.262, elapsed: 6.345 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.007, elapsed: 0.271 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.332, system: 0.643, elapsed: 25.767 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.504, system: 0.039, elapsed: 2.421 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.925, system: 0.074, elapsed: 15.059 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.013, elapsed: 0.345 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.751, system: 0.171, elapsed: 5.958 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.003, elapsed: 0.225 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.068, system: 0.337, elapsed: 24.942 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.462, system: 0.031, elapsed: 2.029 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.899, system: 0.084, elapsed: 13.910 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.012, elapsed: 0.284 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.620, system: 0.169, elapsed: 5.474 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.013, elapsed: 0.405 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.022, system: 0.222, elapsed: 1.108 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.980, system: 0.566, elapsed: 24.167 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.582, system: 0.048, elapsed: 2.440 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.890, system: 0.113, elapsed: 12.492 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.180, system: 0.010, elapsed: 0.256 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.650, system: 0.187, elapsed: 5.632 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.003, elapsed: 0.237 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 9.928, system: 0.437, elapsed: 15.040 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.022, system: 0.826, elapsed: 37.046 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64