Last updated on 2025-12-02 01:49:47 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.58 | 265.72 | 278.30 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.29 | 233.06 | 243.35 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 31.00 | 284.18 | 315.18 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 39.00 | 322.78 | 361.78 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 25.00 | 189.00 | 214.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.60 | 241.19 | 256.79 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.30 | 269.49 | 283.79 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 12.00 | 186.00 | 198.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 186.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 11.00 | 188.00 | 199.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 233.00 | 257.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [86s/134s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.748, system: 0.093, elapsed: 2.327 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.719, system: 0.291, elapsed: 13.878 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.020, elapsed: 0.326 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.127, system: 0.308, elapsed: 6.216 seconds]
Computing values for grid cells...
... done. [user: 0.199, system: 0.016, elapsed: 0.356 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.557, system: 0.766, elapsed: 23.843 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.687, system: 0.057, elapsed: 2.329 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.498, system: 0.151, elapsed: 13.251 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.015, elapsed: 0.383 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.074, system: 0.204, elapsed: 7.232 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.009, elapsed: 0.247 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.199, system: 0.478, elapsed: 24.382 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.596, system: 0.048, elapsed: 2.357 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.675, system: 0.318, elapsed: 12.791 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.205, system: 0.017, elapsed: 0.252 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.231, system: 0.338, elapsed: 5.967 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.004, elapsed: 0.183 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.307, system: 0.277, elapsed: 1.291 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.836, system: 1.054, elapsed: 23.788 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.826, system: 0.106, elapsed: 2.401 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.560, system: 0.168, elapsed: 19.540 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.012, elapsed: 0.525 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.958, system: 0.180, elapsed: 10.516 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.004, elapsed: 0.362 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.770, system: 0.481, elapsed: 20.011 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.183, system: 0.984, elapsed: 54.652 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [85s/134s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.632, system: 0.039, elapsed: 3.045 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.792, system: 0.052, elapsed: 15.523 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.015, elapsed: 0.333 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.775, system: 0.200, elapsed: 6.211 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.004, elapsed: 0.247 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.171, system: 0.336, elapsed: 26.411 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.584, system: 0.043, elapsed: 2.326 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.918, system: 0.078, elapsed: 15.076 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.012, elapsed: 0.330 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.768, system: 0.162, elapsed: 6.242 seconds]
Computing values for grid cells...
... done. [user: 0.184, system: 0.005, elapsed: 0.274 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.193, system: 0.332, elapsed: 25.085 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.623, system: 0.031, elapsed: 2.419 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.927, system: 0.064, elapsed: 14.653 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.011, elapsed: 0.281 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.870, system: 0.211, elapsed: 6.430 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.005, elapsed: 0.278 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.147, system: 0.232, elapsed: 1.090 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.590, system: 0.597, elapsed: 26.139 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.861, system: 0.087, elapsed: 3.162 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.014, system: 0.232, elapsed: 17.637 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.206, system: 0.018, elapsed: 0.370 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.904, system: 0.235, elapsed: 6.159 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.006, elapsed: 0.241 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.813, system: 0.496, elapsed: 18.129 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.619, system: 1.113, elapsed: 46.908 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64