Last updated on 2025-12-02 01:49:36 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.3.6 | 3.40 | 116.55 | 119.95 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.3.6 | 2.03 | 85.15 | 87.18 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.3.6 | OK | ||||
| r-devel-linux-x86_64-fedora-gcc | 0.3.6 | 14.00 | 139.26 | 153.26 | ERROR | |
| r-devel-windows-x86_64 | 0.3.6 | 9.00 | 135.00 | 144.00 | OK | |
| r-patched-linux-x86_64 | 0.3.6 | 5.93 | 110.49 | 116.42 | OK | |
| r-release-linux-x86_64 | 0.3.6 | 3.30 | 110.45 | 113.75 | OK | |
| r-release-macos-arm64 | 0.3.6 | OK | ||||
| r-release-macos-x86_64 | 0.3.6 | 3.00 | 132.00 | 135.00 | OK | |
| r-release-windows-x86_64 | 0.3.6 | 6.00 | 138.00 | 144.00 | OK | |
| r-oldrel-macos-arm64 | 0.3.6 | OK | ||||
| r-oldrel-macos-x86_64 | 0.3.6 | 5.00 | 143.00 | 148.00 | OK | |
| r-oldrel-windows-x86_64 | 0.3.6 | 6.00 | 178.00 | 184.00 | OK |
Version: 0.3.6
Check: examples
Result: ERROR
Running examples in ‘butcher-Ex.R’ failed
The error most likely occurred in:
> ### Name: axe-flexsurvreg
> ### Title: Axing an flexsurvreg.
> ### Aliases: axe-flexsurvreg axe_call.flexsurvreg axe_env.flexsurvreg
>
> ### ** Examples
>
> ## Don't show:
> if (rlang::is_installed("flexsurv")) (if (getRversion() >= "3.4") withAutoprint else force)({ # examplesIf
+ ## End(Don't show)
+ # Load libraries
+ library(parsnip)
+ library(flexsurv)
+
+ # Create model and fit
+ flexsurvreg_fit <- surv_reg(mode = "regression", dist = "gengamma") %>%
+ set_engine("flexsurv") %>%
+ fit(Surv(Tstart, Tstop, status) ~ trans, data = bosms3)
+
+ out <- butcher(flexsurvreg_fit, verbose = TRUE)
+
+ # Another flexsurvreg model object
+ wrapped_flexsurvreg <- function() {
+ some_junk_in_environment <- runif(1e6)
+ fit <- flexsurvreg(Surv(futime, fustat) ~ 1,
+ data = ovarian, dist = "weibull")
+ return(fit)
+ }
+
+ out <- butcher(wrapped_flexsurvreg(), verbose = TRUE)
+ ## Don't show:
+ }) # examplesIf
> library(parsnip)
> library(flexsurv)
Loading required package: survival
> flexsurvreg_fit <- surv_reg(mode = "regression", dist = "gengamma") %>%
+ set_engine("flexsurv") %>% fit(Surv(Tstart, Tstop, status) ~ trans, data = bosms3)
Error:
! `surv_reg()` was deprecated in parsnip 1.4.0 and is now defunct.
ℹ Please use `survival_reg()` instead.
Backtrace:
▆
1. ├─(if (getRversion() >= "3.4") withAutoprint else force)(...)
2. │ └─base::source(...)
3. │ ├─base::withVisible(eval(ei, envir))
4. │ └─base::eval(ei, envir)
5. │ └─base::eval(ei, envir)
6. ├─... %>% ...
7. ├─generics::fit(., Surv(Tstart, Tstop, status) ~ trans, data = bosms3)
8. ├─parsnip::set_engine(., "flexsurv")
9. └─parsnip::surv_reg(mode = "regression", dist = "gengamma")
10. └─lifecycle::deprecate_stop("1.4.0", "surv_reg()", "survival_reg()")
11. └─lifecycle:::deprecate_stop0(msg)
12. └─rlang::cnd_signal(...)
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc