# Bayesian Fractional Polynomials for GLMs

## Documentation for package ‘glmBfp’ version 0.0-51

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

glmBfp-package | Bayesian inference for fractional polynomial models from the GLM and Cox family
as.data.frame.GlmBayesMfp | Convert a GlmBayesMfp object into a data frame
bfp | Mark a covariate for transformation with fractional polynomials
computeModels | Compute model information for a given list of model configurations and glmBayesMfp output.
convert2Mcmc | Convert samples to mcmc objects
coxTBF | Fit Cox models using glmBayesMfp
CustomGPrior | Constructor for the custom g-prior class
CustomGPrior-class | The custom g-prior class
empiricalHpd | Construct an empirical HPD interval from samples
Extract.GlmBayesMfp | Extract method for GlmBayesMfp objects
fpTrans | Transform formula variables
GlmBayesMfp | Bayesian model inference for fractional polynomial GLMs and Cox models
glmBayesMfp | Bayesian model inference for fractional polynomial GLMs and Cox models
GlmBayesMfpSamples-subsetting | Subset method for GlmBayesMfpSamples objects
glmBfp | Bayesian inference for fractional polynomial models from the GLM and Cox family
HypergPrior | Constructor for the hyper-g prior class
HypergPrior-class | The hyper-g prior class
IncInvGammaGPrior | Constructor for the incomplete inverse gamma g-prior class
IncInvGammaGPrior-class | The incomplete inverse gamma g-prior class
inclusionProbs | Compute posterior inclusion probabilites based on GlmBayesMfp object
InvGammaGPrior | Constructor for the inverse gamma g-prior class
InvGammaGPrior-class | The inverse gamma g-prior class
logMargLiks | Extract the log marginal likelihood estimates from a GlmBayesMfp object
logPriors | Extract the log prior values from a GlmBayesMfp object
McmcOptions | Constructor for class McmcOptions
plotCurveEstimate | Function for plotting a fractional polynomial curve estimate
posteriors | Extract posterior model probability estimates from a GlmBayesMfp object
predict.TBFcox | Prediction methods for CoxTBF objects
predict.TBFcox.BMA | Prediction methods for CoxTBF objects for BMA models
predict.TBFcox.sep | Prediction methods for CoxTBF objects with separate estimates
print.GlmBayesMfp | Print a GlmBayesMfp object.
sampleBma | Produce posterior samples from a Bayesian model average over GLMs / Cox models
sampleGlm | Produce posterior samples from one GLM / Cox model
sampleSize | Compute the number of samples for a given MCMC options triple
scrHpd | Calculate an SCB from a samples matrix
uc | Mark a covariate for transformation with fractional polynomials
[-method | Subset method for GlmBayesMfpSamples objects
[.GlmBayesMfp | Extract method for GlmBayesMfp objects