# Identify Signal Subpathways Competitively Regulated by LncRNAs Based on ceRNA Theory

## Documentation for package ‘SubpathwayLNCE’ version 1.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

envData | The variables in the environment variable 'envData' of the system
getBackgroundLnc | Get the background of molecules
GetExampleData | Get the environment data
getInteGraphList | Get the reconstructed signal pathway graphs
getInteUMGraph | Get the reconstructed condition-specific lncRNA-regulated signal pathways
getLncGenePairs | Get the co-express lncRNA-mRNA interactions
getLocSubGraphLnc | Get the located signal subpathways
identifyLncGraphW | Annotate and identify subpathways
plotAnnGraph | Visualize annotated pathway graphs
plotGraphL | Visualize a pathway graph
printGraphW | Print the results of graph annotation and identification