# Log-Linear Poisson Graphical Model with Hot-Deck Multiple Imputation

## Documentation for package ‘RNAseqNet’ version 0.1.4

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

chooseSigma | Select the threshold sigma for hd-MI.
GLMnetToGraph | Convert the result of imputedGLMnetwork or a matrix into a network.
GLMnetwork | Infer a network from RNA-seq expression.
GLMpath | Methods for 'GLMpath' objects.
GLMpath-class | Methods for 'GLMpath' objects.
HDImputed | Methods for 'HDImputed' objects.
HDImputed-class | Methods for 'HDImputed' objects.
HDpath | Methods for 'HDpath' objects.
HDpath-class | Methods for 'HDpath' objects.
imputedGLMnetwork | Multiple hot-deck imputation and network inference from RNA-seq data.
imputeHD | Impute missing row datasets with multiple hot deck.
lung | RNA-seq expression from lung tissue (GTEx).
plot.HDpath | Methods for 'HDpath' objects.
plot.stars | Methods for 'stars' objects.
print.GLMpath | Methods for 'GLMpath' objects.
print.HDImputed | Methods for 'HDImputed' objects.
print.HDpath | Methods for 'HDpath' objects.
print.stars | Methods for 'stars' objects.
RNAseqNetUsersGuide | View RNAseqNet User's Guide
stabilitySelection | Selection of the regularization parameter by StARS (Liu et al., 2010).
stars | Methods for 'stars' objects.
stars-class | Methods for 'stars' objects.
summary.GLMpath | Methods for 'GLMpath' objects.
summary.HDImputed | Methods for 'HDImputed' objects.
summary.HDimputed | Methods for 'HDImputed' objects.
summary.HDpath | Methods for 'HDpath' objects.
summary.stars | Methods for 'stars' objects.
thyroid | RNA-seq expression from thyroid tissue (GTEx).
varIntra | Average intra-donor pool variance.