# Statistical Modeling of Animal Movements

## Documentation for package ‘smam’ version 0.5.3

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

approxNormalOrder | Auxiliary for Preparing Discrete Distribution used to approximating Standard Normal Distribution
approxNormalOrder2 | Auxiliary for Preparing Discrete Distribution used to approximating Standard Normal Distribution
dtm | Density for Time Spent in Moving or Resting
dtr | Density for Time Spent in Moving or Resting
estVarMRMEnaive_Godambe | Variance matrix of estimators from moving-resting process with measurement error
estVarMRMEnaive_pBootstrap | Variance matrix of estimators from moving-resting process with measurement error
estVarMRME_Godambe | Variance matrix of estimators from moving-resting process with measurement error
estVarMRME_pBootstrap | Variance matrix of estimators from moving-resting process with measurement error
fitBMME | Fit a Brownian Motion with Measurement Error
fitBmme | Fit a Brownian Motion with Measurement Error
fitMovRes | Fit a Moving-Resting Model with Embedded Brownian Motion
fitMR | Fit a Moving-Resting Model with Embedded Brownian Motion
fitMRH | Fit a Moving-Resting-Handling Model with Embedded Brownian Motion
fitMRME | Fit a Moving-Resting Model with Measurement Error
fitMRMEapprox | Fit a Moving-Resting Model with Measurement Error
fitMRME_naive | Fit a Moving-Resting Model with Measurement Error
fitPartialViterbiMR | Estimation of states at each time point with Moving-Resting Process
fitPartialViterbiMRH | Estimation of states at each time point with Moving-Resting-Handling Process
fitStateMR | Estimation of states at each time point with Moving-Resting Process
fitStateMRH | Estimation of states at each time point with Moving-Resting-Handling Process
fitViterbiMR | Estimation of states at each time point with Moving-Resting Process
fitViterbiMRH | Estimation of states at each time point with Moving-Resting-Handling Process
integr.control | Auxiliary for Controlling Numerical Integration
rBMME | Sampling from Brown Motion with Measurement Error
rBmme | Sampling from Brown Motion with Measurement Error
rMovRes | Sampling from a Moving-Resting Process with Embedded Brownian Motion
rMR | Sampling from a Moving-Resting Process with Embedded Brownian Motion
rMRH | Sampling from a Moving-Resting-Handling Process with Embedded Brownian Motion
rMRME | Sampling from a Moving-Resting Process with Embedded Brownian Motion
seasonFilter | Subsetting data during given season for each year (seasonal analysis toolbox)
smam | smam: Statistical Modeling of Animal Movements
transfData | Transfer raw dataset to the standard dataset (seasonal analysis toolbox)