# Network Fingerprint Framework in R

## Documentation for package ‘NFP’ version 0.99.3

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

NFP-package | The NFP package
calc_sim_score | Calculating the similarity scores
cluster_info | Extract the cluster information of _NFP_.
cluster_info-method | Extract the cluster information of _NFP_.
cluster_info-methods | Extract the cluster information of _NFP_.
group | Group information of _NFPRefnet_
group-method | Group information of _NFPRefnet_
group-methods | Group information of _NFPRefnet_
install_data_package | Install NFP data package NFPdata
kegg_refnet | Human KEGG signal pathway maps
load_KEGG_refnet | Load the the reference molecular networks
net | Basic networks of _NFPRefnet_ class
net-method | Basic networks of _NFPRefnet_ class
net-methods | Basic networks of _NFPRefnet_ class
NFP | The NFP package
NFP-class | 'NFP-class'
NFPRefnet-class | 'NFPRefnet-class'
perm_score | Extract the randomized similarity score
perm_score-method | Extract the randomized similarity score
perm_score-methods | Extract the randomized similarity score
plot_NFP | Plot NFP results
plot_NFP-method | Plot NFP results
plot_NFP-methods | Plot NFP results
plot_NFPlist | Plot multiple NFPs.
refnet_name | Names of basic networks
refnet_name-method | Names of basic networks
refnet_name-methods | Names of basic networks
show | The show generic function
show-method | The show generic function
show-method | Show an Object
show-methods | The show generic function
show_NFPRefnet | Show an Object
show_NFPRefnet-methods | Show an Object
subnet | Subset the basic networks
subnet-method | Subset the basic networks
subnet-methods | Subset the basic networks
sub_NFP | subset of NFP object
sub_NFP-method | subset of NFP object
sub_NFP-methods | subset of NFP object