# Climate and Ecological Niche Factor Analysis

## Documentation for package ‘CENFA’ version 1.1.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

CENFA-package | Tools for climate- and ecological-niche factor analysis
ABPR | Tree distribution data
brStick | Broken-stick method for detection of significant factors
climdat.fut | Future climate data
climdat.hist | Historical climate data
cnfa | Climate-niche factor analysis
cnfa-class | cnfa-class
cnfa-method | Climate-niche factor analysis
cov | Accessing CENFA slots
cov.cnfa | Accessing CENFA slots
cov.enfa | Accessing CENFA slots
cov.GLcenfa | Accessing CENFA slots
departure | Climatic departure
departure-class | departure-class
departure-method | Climatic departure
enfa | Ecological-niche factor analysis
enfa-class | enfa-class
enfa-method | Ecological-niche factor analysis
exposure_map | Create an exposure map
GLcenfa | Climate-niche factor analysis for reference study area
GLcenfa-class | GLcenfa-class
GLcenfa-method | Climate-niche factor analysis for reference study area
GLdeparture | Climatic departure of reference study area
GLdeparture-class | GLdeparture-class
GLdeparture-method | Climatic departure of reference study area
m.factor | Accessing CENFA slots
marginality | Accessing CENFA slots
names | names
names-method | names
names-method | Accessing CENFA slots
names<--method | names
parCov | Efficient calculation of covariance matrices for Raster* objects
parCov-method | Efficient calculation of covariance matrices for Raster* objects
parScale | Efficient scaling of Raster* objects
parScale-method | Efficient scaling of Raster* objects
predict | Predict methods
predict-method | Predict methods
print.cnfa | Climate-niche factor analysis
print.enfa | Ecological-niche factor analysis
print.GLcenfa | Climate-niche factor analysis for reference study area
print.GLdeparture | Climatic departure of reference study area
QUGA | Tree distribution data
raster | Accessing CENFA slots
raster-method | Accessing CENFA slots
s.factor | Accessing CENFA slots
scatter | Biplots of 'cnfa' and 'enfa' objects.
scatter-method | Biplots of 'cnfa' and 'enfa' objects.
sensitivity | Accessing CENFA slots
sensitivity_map | Create a sensitivity map
SESE | Tree distribution data
show.cnfa | Climate-niche factor analysis
show.enfa | Ecological-niche factor analysis
show.GLcenfa | Climate-niche factor analysis for reference study area
show.GLdeparture | Climatic departure of reference study area
slot-access | Accessing CENFA slots
specialization | Accessing CENFA slots
stretchPlot | Contrast adjustments for RasterLayer plots
stretchPlot-method | Contrast adjustments for RasterLayer plots
tree-data | Tree distribution data
vulnerability | Climatic vulnerability
vulnerability-class | vulnerability-class
vulnerability-method | Climatic vulnerability
vulnerability_map | Create a vulnerability map