simList-accessors-packages	packages
SpaDES.core-package	SpaDES.core-package
.addChangedAttr,simList-method	addChangedAttr
.addDepends	addDepends
.addDepends,simList,.moduleDeps-method	addDepends
.addTagsToOutput,simList-method	addTagsToOutput
.cacheMessage,simList-method	cacheMessage
.callingFrameTimeunit	namespacing
.callingModuleName	namespacing
.callingModuleName,simList-method	namespacing
.checkCacheRepo,list-method	checkCacheRepo
.checkpointSave	checkpoint
.coreModules	coreModules
.depsLoadOrder	depsLoadOrder
.depsLoadOrder,simList,igraph-method	depsLoadOrder
.depsPruneEdges	depsPruneEdges
.depsPruneEdges,data.table-method	depsPruneEdges
.emptyEventList	emptyEventList
.emptyEventList,missing,missing,missing,missing-method	emptyEventList
.emptyEventList,numeric,character,character,numeric-method	emptyEventList
.emptyEventListCols	emptyEventList
.emptyEventListDT	emptyEventList
.emptyMetadata	emptyMetadata
.emptyMetadata,missing-method	emptyMetadata
.fileEdit	fileEdit
.fileExtensions	loadFiles
.fileTableIn	fileTable
.fileTableIn,missing-method	fileTable
.fileTableInCols	fileTable
.fileTableInDF	fileTable
.fileTableOut	fileTable
.fileTableOut,missing-method	fileTable
.fileTableOutCols	fileTable
.fileTableOutDF	fileTable
.fillInputRows	fillInputRows
.fillOutputRows	fillOutputRows
.findElement	findElements
.findElementsInEnv	findElements
.findModuleName	findModuleName
.findObjects	findObjects
.findSimList	findSimList
.first	priority
.getModuleInputObjects	getModuleInputObjects
.getOption	getOption
.highest	priority
.identifyChildModules	identifyChildModules
.isNamespaced	isNamespaced
.keepAttrs	keepAttrs
.last	priority
.lowest	priority
.modifySearchPath	modifySearchPath
.moduleDeps	moduleDeps-class
.moduleDeps-class	moduleDeps-class
.normal	priority
.parseElems,simList-method	parseElems
.parseMessage	parseMessage
.parseModule	parseModule
.parseModule,simList,list-method	parseModule
.parseModulePartial	parseModule
.parseModulePartial,missing,missing,character,character-method	parseModule
.parseModulePartial,simList,list,missing,character-method	parseModule
.parsingSim	findElements
.paths	setPaths
.pkgEnv	pkgEnv
.preDigestByClass,simList-method	preDigestByClass
.prepareOutput,simList-method	prepareOutput
.quickCheck	quickCheck
.robustDigest,simList-method	robustDigest
.runCodeChecks	runCodeChecks
.runModuleInputObjects	runModuleInputsObjects
.saveFileExtensions	loadFiles
.sim2gantt	sim2gantt
.sim2gantt,simList,numeric,character,numeric-method	sim2gantt
.simDeps	simDeps-class
.simDeps-class	simDeps-class
.singleEventListDT	emptyEventList
.spadesTimes	timeConversion
.tagsByClass,simList-method	tagsByClass
.tryCatch	tryCatch
.unparsed	unparsed
.unparsed,list-method	unparsed
.verb	verb
._inputObjectsDF	inputObjectsDF
._inputObjectsDF,missing-method	inputObjectsDF
._outputObjectsDF	inputObjectsDF
._outputObjectsDF,missing-method	inputObjectsDF
all.equal.simList	all.equal.simList
append_attr	append_attr
append_attr,list,list-method	append_attr
Cache	robustDigest
cachePath	simList-accessors-paths
cachePath,simList-method	simList-accessors-paths
cachePath<-	simList-accessors-paths
cachePath<-,simList-method	simList-accessors-paths
checkModule	checkModule
checkModule,character,character-method	checkModule
checkModule,character,missing-method	checkModule
checkModuleLocal	checkModuleLocal
checkModuleLocal,character,ANY,ANY-method	checkModuleLocal
checkModuleLocal,character,character,character-method	checkModuleLocal
checkObject	checkObject
checkObject,missing,ANY,missing,ANY-method	checkObject
checkObject,simList,character,missing,character-method	checkObject
checkObject,simList,character,missing,missing-method	checkObject
checkObject,simList,missing,ANY,missing-method	checkObject
checkObject,simList,missing,Raster,character-method	checkObject
checkParams	checkParams
checkParams,simList,list-method	checkParams
checkpointFile	checkpoint
checkpointFile,simList-method	checkpoint
checkpointFile<-	checkpoint
checkpointFile<-,simList-method	checkpoint
checkpointInterval	checkpoint
checkpointInterval,simList-method	checkpoint
checkpointInterval<-	checkpoint
checkpointInterval<-,simList-method	checkpoint
checkpointLoad	checkpoint
checksums	checksums
checkTimeunit	timeConversion
checkTimeunit,character,environment-method	timeConversion
checkTimeunit,character,missing-method	timeConversion
citation	simList-accessors-metadata
citation,character-method	simList-accessors-metadata
citation,simList-method	simList-accessors-metadata
classFilter	classFilter
classFilter,character,character,character,environment-method	classFilter
classFilter,character,character,character,missing-method	classFilter
classFilter,character,character,missing,environment-method	classFilter
classFilter,character,character,missing,missing-method	classFilter
clearCache,simList-method	clearCache
completed	simList-accessors-events
completed,simList,character-method	simList-accessors-events
completed,simList,missing-method	simList-accessors-events
completed<-	simList-accessors-events
completed<-,simList-method	simList-accessors-events
conditionalEvents	simList-accessors-events
conditionalEvents,simList,character-method	simList-accessors-events
conditionalEvents,simList,missing-method	simList-accessors-events
convertTimeunit	timeConversion
Copy,simList-method	Copy
copyModule	copyModule
copyModule,character,character,character-method	copyModule
copyModule,character,character,missing-method	copyModule
createsOutput	createsOutput
createsOutput,ANY,ANY,ANY-method	createsOutput
createsOutput,character,character,character-method	createsOutput
current	simList-accessors-events
current,simList,character-method	simList-accessors-events
current,simList,missing-method	simList-accessors-events
current<-	simList-accessors-events
current<-,simList-method	simList-accessors-events
currentModule	namespacing
currentModule,simList-method	namespacing
dataPath	simList-accessors-paths
dataPath,simList-method	simList-accessors-paths
dday	spadesTime
defineModule	defineModule
defineModule,simList,list-method	defineModule
defineParameter	defineParameter
defineParameter,character,character,ANY,ANY,ANY,character-method	defineParameter
defineParameter,character,character,ANY,missing,missing,character-method	defineParameter
defineParameter,missing,missing,missing,missing,missing,missing-method	defineParameter
depends	simList-accessors-modules
depends,simList-method	simList-accessors-modules
depends<-	simList-accessors-modules
depends<-,simList-method	simList-accessors-modules
depsEdgeList	depsEdgeList
depsEdgeList,simList,logical-method	depsEdgeList
depsEdgeList,simList,missing-method	depsEdgeList
depsGraph	depsGraph
depsGraph,simList,logical-method	depsGraph
depsGraph,simList,missing-method	depsGraph
dhour	spadesTime
dmonth	spadesTime
dmonths	spadesTime
dmonths,numeric-method	spadesTime
dNA	spadesTime
dNA,ANY-method	spadesTime
documentation	simList-accessors-metadata
documentation,simList-method	simList-accessors-metadata
doEvent	doEvent
doEvent.checkpoint	checkpoint
downloadData	downloadData
downloadData,character,character,logical-method	downloadData
downloadData,character,character,missing-method	downloadData
downloadData,character,missing,logical-method	downloadData
downloadData,character,missing,missing-method	downloadData
downloadModule	downloadModule
downloadModule,character,ANY,ANY,ANY,ANY,ANY,ANY,ANY-method	downloadModule
downloadModule,character,character,character,character,logical,logical,ANY,logical-method	downloadModule
downloadModule,character,missing,missing,missing,missing,missing,ANY,ANY-method	downloadModule
dsecond	spadesTime
dweek	spadesTime
dweeks	spadesTime
dweeks,numeric-method	spadesTime
dyear	spadesTime
dyears	spadesTime
dyears,numeric-method	spadesTime
elapsedTime	simList-accessors-times
elapsedTime.simList	simList-accessors-times
emptyEventList	emptyEventList
end	simList-accessors-times
end.simList	simList-accessors-times
end<-	simList-accessors-times
end<-,simList-method	simList-accessors-times
envir	simList-accessors-envir
envir,simList-method	simList-accessors-envir
envir<-	simList-accessors-envir
envir<-,simList-method	simList-accessors-envir
eventDiagram	eventDiagram
eventDiagram,simList,missing,character-method	eventDiagram
eventDiagram,simList,missing,missing-method	eventDiagram
eventDiagram,simList,numeric,character-method	eventDiagram
events	simList-accessors-events
events,simList,character-method	simList-accessors-events
events,simList,missing-method	simList-accessors-events
events<-	simList-accessors-events
events<-,simList-method	simList-accessors-events
expectsInput	expectsInput
expectsInput,ANY,ANY,ANY,ANY-method	expectsInput
expectsInput,character,character,character,character-method	expectsInput
expectsInput,character,character,character,missing-method	expectsInput
experiment	deprecated
experiment2	deprecated
extractURL	extractURL
extractURL,character,missing-method	extractURL
extractURL,character,simList-method	extractURL
fileName	fileName
findObjects	findObjects
G	globals
G,simList-method	globals
G<-	globals
G<-,simList-method	globals
ganttStatus	ganttStatus
ganttStatus,character-method	ganttStatus
getModuleVersion	getModuleVersion
getModuleVersion,character,character-method	getModuleVersion
getModuleVersion,character,missing-method	getModuleVersion
getPaths	setPaths
globals	globals
globals,simList-method	globals
globals<-	globals
globals<-,simList-method	globals
initialize,simList-method	initialize-method
initialize,simList_-method	initialize-method
inputArgs	simList-accessors-inputs
inputArgs,simList-method	simList-accessors-inputs
inputArgs<-	simList-accessors-inputs
inputArgs<-,simList-method	simList-accessors-inputs
inputObjects	simList-accessors-metadata
inputObjects,simList-method	simList-accessors-metadata
inputPath	simList-accessors-paths
inputPath,simList-method	simList-accessors-paths
inputPath<-	simList-accessors-paths
inputPath<-,simList-method	simList-accessors-paths
inputs	simList-accessors-inputs
inputs,simList-method	simList-accessors-inputs
inputs<-	simList-accessors-inputs
inputs<-,simList-method	simList-accessors-inputs
inSeconds	timeConversion
keepCache,simList-method	clearCache
loadFiles	loadFiles
loadFiles,missing,ANY-method	loadFiles
loadFiles,missing,missing-method	loadFiles
loadFiles,simList,missing-method	loadFiles
loadPackages	loadPackages
loadPackages,character-method	loadPackages
loadPackages,list-method	loadPackages
loadPackages,NULL-method	loadPackages
makeMemoisable.simList	makeMemoisable
maxTimeunit	maxTimeunit
maxTimeunit,simList-method	maxTimeunit
memoryUse	memoryUse
memoryUseThisSession	memoryUse
minTimeunit	minTimeunit
minTimeunit,list-method	minTimeunit
minTimeunit,simList-method	minTimeunit
moduleCoverage	moduleCoverage
moduleCoverage,character,character-method	moduleCoverage
moduleCoverage,character,missing-method	moduleCoverage
moduleDefaults	moduleDefaults
moduleDiagram	moduleDiagram
moduleDiagram,simList,character,logical-method	moduleDiagram
moduleDiagram,simList,missing,ANY-method	moduleDiagram
moduleGraph	moduleGraph
moduleGraph,simList,logical-method	moduleGraph
moduleGraph,simList,missing-method	moduleGraph
moduleMetadata	moduleMetadata
moduleMetadata,ANY,ANY,ANY-method	moduleMetadata
moduleMetadata,missing,character,character-method	moduleMetadata
moduleMetadata,missing,character,missing-method	moduleMetadata
modulePath	simList-accessors-paths
modulePath,simList-method	simList-accessors-paths
modulePath<-	simList-accessors-paths
modulePath<-,simList-method	simList-accessors-paths
modules	simList-accessors-modules
modules,simList-method	simList-accessors-modules
modules<-	simList-accessors-modules
modules<-,simList-method	simList-accessors-modules
moduleVersion	moduleVersion
moduleVersion,character,character,missing-method	moduleVersion
moduleVersion,character,missing,missing-method	moduleVersion
moduleVersion,character,missing,simList-method	moduleVersion
newModule	newModule
newModule,character,character-method	newModule
newModule,character,missing-method	newModule
newModuleCode	newModuleCode
newModuleCode,character,character,logical,character,character-method	newModuleCode
newModuleDocumentation	newModuleDocumentation
newModuleDocumentation,character,character,logical,character,character-method	newModuleDocumentation
newModuleDocumentation,character,character,missing,ANY,ANY-method	newModuleDocumentation
newModuleDocumentation,character,missing,logical,ANY,ANY-method	newModuleDocumentation
newModuleDocumentation,character,missing,missing,ANY,ANY-method	newModuleDocumentation
newModuleTests	newModuleTests
newModuleTests,character,character,logical-method	newModuleTests
newProgressBar	progressBar
newProject	newProject
newProject,character,character,logical-method	newProject
newProject,character,character,missing-method	newProject
newProjectCode	newProjectCode
newProjectCode,character,character,logical-method	newProjectCode
objectDiagram	objectDiagram
objectDiagram,simList-method	objectDiagram
objectSynonyms	objectSynonyms
objs	objects
objs,simList-method	objects
objs<-	objects
objs<-,simList-method	objects
objSize.simList	objSize.simList
openModules	openModules
openModules,character,character-method	openModules
openModules,character,missing-method	openModules
openModules,missing,character-method	openModules
openModules,missing,missing-method	openModules
openModules,simList,missing-method	openModules
outputArgs	simList-accessors-outputs
outputArgs,simList-method	simList-accessors-outputs
outputArgs<-	simList-accessors-outputs
outputArgs<-,simList-method	simList-accessors-outputs
outputObjectNames	simList-accessors-metadata
outputObjectNames,simList-method	simList-accessors-metadata
outputObjects	simList-accessors-metadata
outputObjects,simList-method	simList-accessors-metadata
outputPath	simList-accessors-paths
outputPath,simList-method	simList-accessors-paths
outputPath<-	simList-accessors-paths
outputPath<-,simList-method	simList-accessors-paths
outputs	simList-accessors-outputs
outputs,simList-method	simList-accessors-outputs
outputs<-	simList-accessors-outputs
outputs<-,simList-method	simList-accessors-outputs
P	params
packages	packages
packages,ANY-method	packages
paddedFloatToChar	paddedFloatToChar
parameters	params
parameters,simList-method	params
params	params
params,simList-method	params
params<-	params
params<-,simList-method	params
Paths	setPaths
paths	simList-accessors-paths
paths,simList-method	simList-accessors-paths
paths<-	simList-accessors-paths
paths<-,simList-method	simList-accessors-paths
Plot,simList-method	Plot
POM	deprecated
priority	priority
progressInterval	progress
progressInterval,simList-method	progress
progressInterval<-	progress
progressInterval<-,simList-method	progress
progressType	progress
progressType,simList-method	progress
progressType<-	progress
progressType<-,simList-method	progress
rasterPath	simList-accessors-paths
rasterPath,simList-method	simList-accessors-paths
rasterPath<-	simList-accessors-paths
rasterPath<-,simList-method	simList-accessors-paths
rasterToMemory	rasterToMemory
rasterToMemory,ANY-method	rasterToMemory
remoteFileSize	remoteFileSize
reqdPkgs	simList-accessors-metadata
reqdPkgs,simList-method	simList-accessors-metadata
restartR	restartR
restartSpades	restartSpades
rndstr	rndstr
rndstr,missing,missing,logical-method	rndstr
rndstr,missing,missing,missing-method	rndstr
rndstr,missing,numeric,logical-method	rndstr
rndstr,missing,numeric,missing-method	rndstr
rndstr,numeric,missing,logical-method	rndstr
rndstr,numeric,missing,missing-method	rndstr
rndstr,numeric,numeric,logical-method	rndstr
rndstr,numeric,numeric,missing-method	rndstr
saveFiles	saveFiles
saveSimList	saveSimList
scheduleConditionalEvent	scheduleConditionalEvent
scheduleEvent	scheduleEvent
setPaths	setPaths
setProgressBar	progressBar
show,simList-method	show-method
showCache,simList-method	clearCache
simInit	simInit
simInit,ANY,ANY,ANY,ANY,ANY,ANY,ANY,ANY-method	simInit
simInit,ANY,ANY,ANY,character,ANY,ANY,ANY,ANY-method	simInit
simInit,ANY,ANY,character,ANY,ANY,ANY,ANY,ANY-method	simInit
simInit,list,list,list,list,list,data.frame,data.frame,character-method	simInit
simInitAndExperiment	deprecated
simInitAndSpades	simInitAnd
simList	simList-class
simList-accessors-envir	simList-accessors-envir
simList-accessors-events	simList-accessors-events
simList-accessors-inout	simList-accessors-inputs
simList-accessors-metadata	simList-accessors-metadata
simList-accessors-modules	simList-accessors-modules
simList-accessors-objects	objects
simList-accessors-params	params
simList-accessors-paths	simList-accessors-paths
simList-accessors-times	simList-accessors-times
simList-class	simList-class
simList_	simList-class
simList_-class	simList-class
spades	spades
spades,ANY,ANY,ANY,logical-method	spades
spades,simList,ANY,ANY,missing-method	spades
SpaDES.core	SpaDES.core-package
spadesClasses	spades-classes
spadesOptions	spadesOptions
spadesTimes	timeConversion
start	simList-accessors-times
start.simList	simList-accessors-times
start<-	simList-accessors-times
start<-,simList-method	simList-accessors-times
suppliedElsewhere	suppliedElsewhere
time.simList	simList-accessors-times
time<-	simList-accessors-times
time<-,simList-method	simList-accessors-times
times	simList-accessors-times
times,simList-method	simList-accessors-times
times<-	simList-accessors-times
times<-,simList-method	simList-accessors-times
timeunit	simList-accessors-times
timeunit,simList-method	simList-accessors-times
timeunit<-	simList-accessors-times
timeunit<-,simList-method	simList-accessors-times
timeunits	simList-accessors-times
timeunits,simList-method	simList-accessors-times
unmakeMemoisable.simList_	makeMemoisable
updateList	updateList
updateList,list,list-method	updateList
updateList,list,NULL-method	updateList
updateList,NULL,list-method	updateList
updateList,NULL,NULL-method	updateList
zipModule	zipModule
zipModule,character,character,character-method	zipModule
zipModule,character,character,missing-method	zipModule
zipModule,character,missing,character-method	zipModule
zipModule,character,missing,missing-method	zipModule
zipSimList	zipSimList
