Package: MLMOI
Type: Package
Title: Estimating Frequencies, Prevalence and Multiplicity of Infection
Version: 0.1.1
Authors@R: c(person("Meraj", "Hashemi", role = c("cre", "aut", "com"), email = "mhashemi@hs-mittweida.de"),
             person("Kristan", "Schneider", role = c("aut", "ths"), email = "kristan.schneider@hs-mittweida.de"))
Maintainer: Meraj Hashemi <mhashemi@hs-mittweida.de>
Description: The implemented methods reach out to scientists that seek to estimate multiplicity of infection (MOI) and lineage (allele) frequencies and prevalences at molecular markers using the maximum-likelihood method described in Schneider (2018) <doi:10.1371/journal.pone.0194148>, and Schneider and Escalante (2014) <doi:10.1371/journal.pone.0097899>. Users can import data from Excel files in various formats, and perform maximum-likelihood estimation on the imported data by the package's moimle() function.
Depends: R (>= 3.3.0)
Imports: XLConnect (>= 0.2-15), rJava (>= 0.9-10), Rdpack (>= 0.10-1),
        Rmpfr (>= 0.7-1),
License: GPL-3
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.0.2
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
RdMacros: Rdpack
NeedsCompilation: no
Packaged: 2020-01-08 11:35:01 UTC; Meraj
Author: Meraj Hashemi [cre, aut, com],
  Kristan Schneider [aut, ths]
Repository: CRAN
Date/Publication: 2020-01-10 17:30:02 UTC
Built: R 3.5.2; ; 2020-01-11 08:36:03 UTC; unix
