# Generalized Dissimilarity Modeling

## Documentation for package ‘gdm’ version 1.3.11

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

gdm-package | Overview of the functions in the gdm package
formatsitepair | Converts Common Biological (Response) and Environmental (Predictor) Data Formats to a GDM Site-Pair Table
gdm | Fit a Generalized Dissimilarity Model to Tabular Site-Pair Data
gdm.transform | Transform Environmental Data Using a Generalized Dissimilarity Model
gdm.varImp | Quantify model significance and variable importance/significance in gdm using matrix permutation.
gdmDissim | A sample biological dissimilarity matrix for use in GDM examples
gdmExpData | Species and environmental data used in GDM examples
isplineExtract | Extract I-spline Values From a gdm Object.
plot | Plot model fit and I-splines from a generalized dissimilarity model
plot.gdm | Plot model fit and I-splines from a generalized dissimilarity model
plotUncertainty | Plot I-splines with error bands using bootstrapping.
predict | Predict Biological Dissimilarities Between Sites or Times Using a Generalized Dissimilarity Model
predict.gdm | Predict Biological Dissimilarities Between Sites or Times Using a Generalized Dissimilarity Model
removeSitesFromSitePair | Remove Random Sites from Site-Pair Table
stackedVars | Worldclim climate variables used to fit GDM in examples
summary | Summarize a Fitted Generalized Dissimilarity Model
summary.gdm | Summarize a Fitted Generalized Dissimilarity Model