# Generalized Diffusion Magnetic Resonance Imaging

## Documentation for package ‘gdimap’ version 0.1-9

- DESCRIPTION file.
- Package NEWS.

## Help Pages

gdimap-package | Generalized Diffusion Magnetic Resonance Imaging
btable | b-Table File for Shell Data
data | A Real Dataset for Diffusion MRI Analysis
data.bval | b-Table File
data.bvec | 3D b-table Vectors for Data Acquisition
data_brain_mask | Example of Mask File Used in Diffusion MRI Processing
data_gfa | Generalized Fractional Anisotropy (GFA) File
data_V1 | ODF First Principal Directions File
data_V2 | ODF Second Principal Directions File
dec | Directionally-Encoded Color (DEC) Representation
gqi.odfpeaklines | Fibre Orientation Mapping Based on Local Peak Detection
gqi.odfpeaks | Main Fibre Orientation Determination via Peak Detection with GQI Reconstruction
gqi.odfvmf | Fibre Orientation Estimation Based on von Mises Distributions with GQI Reconstruction
gqi.odfvmflines | Fibre Orientation Mapping Based on von Mises-Fisher Distributions with GQI Reconstruction
gqi.odfvxgrid | Glyph Maps
niinorm | Normalization of Principal Diffusion Directions
plotglyph | 3D Glyph Visualization
rgbvolmap | Generalized Fractional Anisotropy (GFA) Maps (RGB Maps)
s2tessel.zorder | 3D Shell Grid Tessellation
simul.fandtasia | Simulation of Curved Fibre Bundles for von Mises-Fisher Fibre Orientation Mapping
simul.fandtasiaSignal | Simulation of Crossing-Fibre Diffusion Profiles
simul.simplefield | Simulation of a Simple Field of Diffusion Profiles for von Mises-Fisher Fibre Orientation Mapping
simulglyph.vmf | Voxel Diffusion Profile Simulation and von Mises-Fisher Fibre Mapping
slfcst | A Region-of-Interest (ROI) File for Diffusion MRI Analysis
sph.odfpeaklines | Fibre Orientation Mapping Based on Local Peak Detection with QBI Reconstruction
sph.odfpeaks | Main Fibre Orientation Determination via Peak Detection with Q-ball Reconstruction
sph.odfvmf | Fibre Orientation Estimation Based on von Mises Distributions with Q-ball Reconstruction
sph.odfvmflines | Fibre Orientation Mapping Based on von Mises-Fisher Distributions with QBI reconstruction
sph.odfvxgrid | Glyph Maps
synthfiberss2z | Voxel Diffusion Profiles for Multiple Fibre Simulation