# Fits Integral Projection Models Using an Expression Based Framework

## Documentation for package ‘ipmr’ version 0.0.1

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

%^% | Raise a matrix to a power
collapse_pop_state | Extract threshold based population size information
define_domains | Helpers for IPM construction
define_env_state | Helpers for IPM construction
define_impl | Helpers for IPM construction
define_kernel | Functions to initialize and define IPM kernels
define_pop_state | Helpers for IPM construction
discrete_extrema | Eviction correction
domains | Accessor functions for (proto_)ipm objects
domains.default | Accessor functions for (proto_)ipm objects
domains.proto_ipm | Accessor functions for (proto_)ipm objects
format_mega_matrix | Create iteration kernels from an IPM object
format_mega_matrix.age_x_size_ipm | Create iteration kernels from an IPM object
format_mega_matrix.default | Create iteration kernels from an IPM object
gen_di_det_ex | A general deterministic IPM example
iceplant_ex | Raw demographic data to construct an example IPM
init_ipm | Initialize an IPM
int_mesh | Accessor functions for (proto_)ipm objects
ipm_to_df | Convert ipmr matrix to long data frame
ipm_to_df.array | Convert ipmr matrix to long data frame
ipm_to_df.default | Convert ipmr matrix to long data frame
is_conv_to_asymptotic | Check for model convergence to asymptotic dynamics
kernel_formulae | Accessor functions for (proto_)ipm objects
kernel_formulae.default | Accessor functions for (proto_)ipm objects
kernel_formulae.proto_ipm | Accessor functions for (proto_)ipm objects
kernel_formulae<- | Accessor functions for (proto_)ipm objects
kernel_formulae<-.proto_ipm | Accessor functions for (proto_)ipm objects
lambda | Compute the per-capita growth rate for an IPM object
lambda.general_dd_det_ipm | Compute the per-capita growth rate for an IPM object
lambda.general_dd_stoch_kern_ipm | Compute the per-capita growth rate for an IPM object
lambda.general_dd_stoch_param_ipm | Compute the per-capita growth rate for an IPM object
lambda.general_di_det_ipm | Compute the per-capita growth rate for an IPM object
lambda.general_di_stoch_kern_ipm | Compute the per-capita growth rate for an IPM object
lambda.general_di_stoch_param_ipm | Compute the per-capita growth rate for an IPM object
lambda.simple_dd_det_ipm | Compute the per-capita growth rate for an IPM object
lambda.simple_dd_stoch_kern_ipm | Compute the per-capita growth rate for an IPM object
lambda.simple_dd_stoch_param_ipm | Compute the per-capita growth rate for an IPM object
lambda.simple_di_det_ipm | Compute the per-capita growth rate for an IPM object
lambda.simple_di_stoch_kern_ipm | Compute the per-capita growth rate for an IPM object
lambda.simple_di_stoch_param_ipm | Compute the per-capita growth rate for an IPM object
left_ev | Compute the standardized left and right eigenvectors via iteration
left_ev.general_di_det_ipm | Compute the standardized left and right eigenvectors via iteration
left_ev.simple_di_det_ipm | Compute the standardized left and right eigenvectors via iteration
left_mult | Right/left multiplication
make_impl_args_list | Helpers for IPM construction
make_ipm | Methods to implement an IPM
make_ipm.general_dd_det | Methods to implement an IPM
make_ipm.general_dd_stoch_kern | Methods to implement an IPM
make_ipm.general_dd_stoch_param | Methods to implement an IPM
make_ipm.general_di_det | Methods to implement an IPM
make_ipm.general_di_stoch_kern | Methods to implement an IPM
make_ipm.general_di_stoch_param | Methods to implement an IPM
make_ipm.simple_dd_det | Methods to implement an IPM
make_ipm.simple_dd_stoch_kern | Methods to implement an IPM
make_ipm.simple_dd_stoch_param | Methods to implement an IPM
make_ipm.simple_di_det | Methods to implement an IPM
make_ipm.simple_di_stoch_kern | Methods to implement an IPM
make_ipm.simple_di_stoch_param | Methods to implement an IPM
make_iter_kernel | Create iteration kernels from an IPM object
mat_power | Raise a matrix to a power
mean_kernel | Mean kernels for stochastic models
new_fun_form | Accessor functions for (proto_)ipm objects
parameters | Accessor functions for (proto_)ipm objects
parameters.default | Accessor functions for (proto_)ipm objects
parameters.proto_ipm | Accessor functions for (proto_)ipm objects
parameters<- | Accessor functions for (proto_)ipm objects
parameters<-.proto_ipm | Accessor functions for (proto_)ipm objects
plot.general_di_det_ipm | Plot a matrix or an *_ipm object
plot.ipmr_matrix | Plot a matrix or an *_ipm object
plot.simple_di_det_ipm | Plot a matrix or an *_ipm object
plot.simple_di_stoch_kern_ipm | Plot a matrix or an *_ipm object
plot.simple_di_stoch_param_ipm | Plot a matrix or an *_ipm object
pop_state | Accessor functions for (proto_)ipm objects
pop_state.default | Accessor functions for (proto_)ipm objects
pop_state.proto_ipm | Accessor functions for (proto_)ipm objects
print.general_di_det_ipm | Print proto_ipms or *_ipm objects
print.general_di_stoch_kern_ipm | Print proto_ipms or *_ipm objects
print.general_di_stoch_param_ipm | Print proto_ipms or *_ipm objects
print.proto_ipm | Print proto_ipms or *_ipm objects
print.simple_di_det_ipm | Print proto_ipms or *_ipm objects
print.simple_di_stoch_kern_ipm | Print proto_ipms or *_ipm objects
print.simple_di_stoch_param_ipm | Print proto_ipms or *_ipm objects
right_ev | Compute the standardized left and right eigenvectors via iteration
right_ev.general_di_det_ipm | Compute the standardized left and right eigenvectors via iteration
right_ev.simple_di_det_ipm | Compute the standardized left and right eigenvectors via iteration
right_mult | Right/left multiplication
sim_di_det_ex | Simple deterministic IPM example
truncated_distributions | Eviction correction
use_vr_model | Predict methods in ipmr
vital_rate_exprs | Accessor functions for (proto_)ipm objects
vital_rate_exprs.default | Accessor functions for (proto_)ipm objects
vital_rate_exprs.proto_ipm | Accessor functions for (proto_)ipm objects
vital_rate_exprs<- | Accessor functions for (proto_)ipm objects
vital_rate_exprs<-.proto_ipm | Accessor functions for (proto_)ipm objects
vital_rate_funs | Accessor functions for (proto_)ipm objects