# Data Package for 'pathfindR'

## Documentation for package ‘pathfindR.data’ version 1.1.1

- DESCRIPTION file.

## Help Pages

biocarta_descriptions | BioCarta Pathways - Descriptions
biocarta_genes | BioCarta Pathways - Gene Sets
biogrid_adj_list | BioGRID PIN Adjacency List
cell_markers_descriptions | Human Cell Markers - Descriptions
cell_markers_gsets | Human Cell Markers - Gene Sets
custom_result | Custom Gene Set Enrichment Results
example_active_snws | Example Active Subnetworks
genemania_adj_list | GeneMania PIN Adjacency List
go_all_genes | Gene Ontology - All Gene Ontology Gene Sets
GO_all_terms_df | Gene Ontology - All Gene Ontology Descriptions
intact_adj_list | IntAct PIN Adjacency List
kegg_adj_list | KEGG PIN Adjacency List
kegg_descriptions | KEGG Pathways - Descriptions
kegg_genes | KEGG Pathways - Gene Sets
mmu_kegg_descriptions | Mus Musculus KEGG Pathways - Descriptions
mmu_kegg_genes | Mus Musculus KEGG Pathways - Gene Sets
mmu_string_adj_list | Mus musculus STRING PIN Adjacency List
myeloma_input | Example Input for Myeloma Analysis (Mus Musculus)
myeloma_output | Example Output for Myeloma Analysis (Mus Musculus)
pathfindR.data_updates | Table of Data for pathfindR
RA_clustered | Example Output for the pathfindR Clustering Workflow - Rheumatoid Arthritis
RA_comparison_output | Second Example Output for the pathfindR Enrichment Workflow
RA_exp_mat | Example Input for pathfindR - Enriched Term Scoring
RA_input | Example Input for the pathfindR Enrichment Workflow - Rheumatoid Arthritis
RA_output | Example Output for the pathfindR Enrichment Workflow - Rheumatoid Arthritis
reactome_descriptions | Reactome Pathways - Descriptions
reactome_genes | Reactome Pathways - Gene Sets
string_adj_list | STRING PIN Adjacency List