Package: aaSEA
Type: Package
Title: Amino Acid Substitution Effect Analyser
Version: 1.1.0
Author: Raja Sekhara Reddy D.M
Maintainer: Raja Sekhara Reddy D.M <raja.duvvuru@gmail.com>
Description: Given a protein multiple sequence alignment, it is daunting task to assess the effects of substitutions along sequence length. 'aaSEA' package is intended to help researchers to rapidly analyse property changes caused by single, multiple and correlated amino acid substitutions in proteins. Methods for identification of co-evolving positions from multiple sequence alignment are as described in :  Pelé et al., (2017) <doi:10.4172/2379-1764.1000250>.
Depends: R(>= 3.4.0)
Imports: DT(>= 0.4), networkD3(>= 0.4), shiny(>= 1.0.5),
        shinydashboard(>= 0.7.0), magrittr(>= 1.5), Bios2cor(>= 2.0),
        seqinr(>= 3.4-5), plotly(>= 4.7.1), Hmisc(>= 4.1-1)
License: GPL-3
Encoding: UTF-8
LazyData: true
RoxygenNote: 6.1.1
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2019-11-09 15:35:46 UTC; sai
Repository: CRAN
Date/Publication: 2019-11-09 16:20:02 UTC
Built: R 4.1.0; ; 2021-02-20 10:12:44 UTC; unix
