# Tools to Read and Manipulate Fisheries Data

## Documentation for package ‘RstoxData’ version 1.1.1

- DESCRIPTION file.

## Help Pages

RstoxData-package | Tools to Read and Manipulate Fisheries Data
AcousticData | StoX data type AcousticData
AddToStoxBiotic | Add variables to StoxBioticData from BioticData
backwardCompatibility | Backward compabitibility actions:
BioticData | StoX data type BioticData
ConvertAcoustic | Convert AcousticData
ConvertBiotic | Convert BioticData
ConvertStoxAcoustic | Convert StoxAcousticData
ConvertStoxBiotic | Convert StoxBioticData
DataTypes | StoX data types of the RstoxData package
DefineTranslation | Define translation
FilterAcoustic | Filter (raw) Acoustic data
FilterBiotic | Filter (raw) Biotic data
filterData | Run filter on any StoX related data source
FilterLanding | Filter LandingData
FilterStoxAcoustic | Filter StoxAcoustic data
FilterStoxBiotic | Filter StoxBiotic data
FilterStoxLanding | Filter StoxLanding data
general_arguments | General parameters of RstoxData.
getRstoxDataDefinitions | Get RstoxData definitions
getStoxKeys | Get the keys of a StoX format
ICESAcoustic | Converts 'AcousticData' to 'ICESAcousticData'
ICESAcousticData | StoX data type ICESAcousticData
ICESBiotic | Write ICES biotic CSV format file
ICESBioticData | StoX data type ICESBioticData
ICESDatras | Write ICES DATRAS (NS-IBTS) format file
ICESDatrasData | StoX data type ICESDatrasData
is.LandingData | Check if argument is LandingData
is.StoxLandingData | Check if argument is StoxLandingData
LandingData | LandingData
lapplyOnCores | Run a function on all elements of x on one or more cores
mapplyOnCores | Run a function on all elements of x on one or more cores
mergeByIntersect | Merge two data tables by the intersect of the names
mergeByStoxKeys | Merge two data tables by StoX keys
mergeDataTables | Merge list of data tables recursively
MergeStoxAcoustic | Merge StoxAcousticData
MergeStoxAcousticData | StoX data type MergeStoxAcousticData
MergeStoxBiotic | Merge StoxBioticData
MergeStoxBioticData | StoX data type MergeStoxBioticData
ModelData | StoX data types of the RstoxData package
parseInterCatch | Parses InterCatch
ProcessData | Process data used in estimation models in StoX
processPropertyFormats | Define the process property formats:
ReadAcoustic | Read acoustic XML files
ReadBiotic | Read biotic XML files
readErsFile | Parses logbooks (ERS)
ReadLanding | Read landing XML files
readLssFile | Parses landings (sales notes)
readXmlFile | Read fisheries XML data format file
RedefineStoxBiotic | Redefine StoxBioticData variables by data from BioticData
ReportICESAcoustic | Reports 'ICESAcousticData' to a csv file for each input acoustic file used to create the 'ICESAcousticData'
ReportICESAcousticData | Rbind 'ICESAcousticData' to a string matrix.
ReportICESBiotic | Reports 'ICESBioticData' to a csv file for each input acoustic file used to create the 'ICESBioticData'
ReportICESBioticData | Rbind 'ICESBioticData' to a string matrix.
ReportICESDatras | Reports 'ICESDatrasData' to a csv file for each input acoustic file used to create the 'ICESDatras'
ReportICESDatrasData | Rbind 'ICESDatrasData' to a string matrix.
RstoxData | Tools to Read and Manipulate Fisheries Data
setorderv_numeric | Order a data.table (by reference) by interpreting characters as numeric if possible
setRstoxPrecisionLevel | Round off to number of digits
StoxAcoustic | Convert AcousticData to StoxAcousticData
StoxAcousticData | StoX data type StoxAcousticData
StoxBiotic | Convert BioticData to StoxBioticData
StoxBioticData | StoX data type StoxBioticData
stoxBioticObject | stoxBioticObject
stoxFunctionAttributes | Function specification for inclusion in StoX projects
StoxLanding | Convert landing data
StoxLandingData | StoxLandingData
TranslateAcoustic | Translate AcousticData
TranslateBiotic | Translate BioticData
TranslateLanding | Translate LandingData
TranslateStoxAcoustic | Translate StoxAcousticData
TranslateStoxBiotic | Translate StoxBioticData
TranslateStoxLanding | Translate StoxLandingData
Translation | Translation definition (from file or from table).
xsdObjects | xsdObjects